March 8, 2017 Using a watershed algorithm, the APD Colony Counter App developed by A*STAR researchers can cheaply count the bacterial colonies on a culture plate on-the-go. Credit: A*STAR Bioinformatics Institute An Android application could dramatically change how microbiologists quantify data and how they go about their work. The 'APD Colony Counter App' suite was developed by A*STAR scientists working with Temasek Polytechnic graduates. Downloaded almost 9,000 times in less than a year, the app provides a cost-effective, accurate alternative to a laborious manual task and lets researchers analyse their data over coffee, with just a few taps on their phone. In 2015 Samuel Gan and his team from the A*STAR Bioinformatics Institute and James Cook University, Singapore, were studying how bacterial counts in human noses and ears correlated with psychological stress, wellbeing and happiness. Simultaneously, they were stressing out over the significant amount of time needed to quantify their data. Counting bacterial colonies on even a single culture plate is a laborious task which can take up to half an hourand Gan's team was quantifying hundreds. "To manually count these plates takes a lot of time and effortand can bring about error from fatigue," explains Gan. While expensive lab … Continue reading
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