Contact Information Available for logged-in reporters only Newswise Its like looking for a needle in a haystack. Scientists searching for the gene or gene combination that affects even one plant or animal characteristic must sort through massive amounts of data, according to associate professor Xijin Ge of the mathematics and statistics department at South Dakota State University. Biologists used to study one gene at time, but now they can look at tens of thousands of genes at once. Ge said. Just one experiment to analyze gene expression can produce one terabyte of sequence data. Thats a little beyond many biologists' comfort zone. He leads the bioinformatics research group, which provides the expertise that SDSU plant and animal scientists need to uncover how genes and proteins affect cell functions. Setting up the experiments Typically, scientists consult with Ge when planning their studies. After examining what they want to investigate, the researchers decide which techniques should be used to obtain data and a plan to analyze the data. Its critical to have the statistician and biologist working together, noted plant science professor Fedora Sutton, who worked with Ge on identifying gene interactions that account for freeze resistance in winter wheat. He is … Continue reading
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